Then, the profiling of the non-coding RNAs (section 5.4.6) can be performed by selecting the RNAs classes to focus on and the associated extension parameters as presented in section 5.4.2 (Figure 4).
Regarding the ncRNAs from the RFAM database, several targets can be specified. The profiling analysis will be separately done for each input keyword.
Figure 4:
ncPRO-seq web interface: annotation of ncRNAs
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Nicolas Servant
2012-05-31